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nf-core/phaseimpute
Edit

A bioinformatics pipeline to phase and impute genetic data

genomicsgenotypeimputationlow-pass-sequencingphasing
This is the development version of the pipeline.
Launch development version https://github.com/nf-core/phaseimpute
  • Introduction
  • Usage
  • Parameters
  • Output
  • Releases
    • 1.1.0
    • 1.0.0
    • dev
Introduction Usage Parameters Output Releases
  • 1.1.0
  • 1.0.0
  • dev
run with
See the docs on how to configure the Seqera Platform CLI.
  • nf-core
  • Nextflow
  • Seqera Platform
subscribers
164
stars
28
open issues
23
open PRs
4
last release
3 months ago
last update
3 months ago
included modules
bcftools_annotatebcftools_concatbcftools_convertbcftools_indexbcftools_merge and 34 more modules
included subworkflows
bam_impute_quiltbam_impute_stitchbam_subsampledepth_samtoolsbam_vcf_impute_glimpse2utils_nextflow_pipeline and 5 more subworkflows
contributors
Github user LouisLeNezet
Github user atrigila
Github user eugeniafontecha
Github user hemanoel
Github user mrvictorica
Github user nschcolnicov
Github user JoseEspinosa
Github user mashehu
Github user maxulysse
get help
Ask a question on Slack Open an issue on GitHub

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